2VS8
The crystal structure of i-dmoi in complex with dna and mn
PDB DOI: 10.2210/pdb2vs8/pdb
Classification: DNA BINDING PROTEIN Organism(s): Desulfurococcus Mobilis , Synthetic Construct
Deposited: 2008-04-21 Deposition Author(s): Alibes, A. , Blanco, F.J. , Duchateau, P. , Grizot, S. , Marcaida, M.J. , Montoya, G. , Nadra, A.D. , Paques, F. , Prieto, J. , Redondo, P. , Serrano, L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.1 Å
The crystal structure of i-dmoi in complex with dna and mn
Alibes, A. , Blanco, F.J. , Duchateau, P. , Grizot, S. , Marcaida, M.J. , Montoya, G. , Nadra, A.D. , Paques, F. , Prieto, J. , Redondo, P. , Serrano, L.
Primary Citation of Related Structures: 2VS8
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HOMING ENDONUCLEASE I-DMOI | A | 200 | Desulfurococcus Mobilis , Synthetic Construct | MAHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| HOMING ENDONUCLEASE I-DMOI | F | 200 | Desulfurococcus Mobilis , Synthetic Construct | MAHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| HOMING ENDONUCLEASE I-DMOI | K | 200 | Desulfurococcus Mobilis , Synthetic Construct | MAHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP *GP*TP*AP*A)-3' | b | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP *GP*TP*AP*A)-3' | g | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP *GP*TP*AP*A)-3' | l | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP* DGP*DCP*DGP)-3' | c | 11 | NA | GTTCCGGCGCG |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP* DGP*DCP*DGP)-3' | h | 11 | NA | GTTCCGGCGCG |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP* DGP*DCP*DGP)-3' | m | 11 | NA | GTTCCGGCGCG |
| 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP *CP*TP*TP*AP*C)-3' | d | 15 | NA | CGCGCCGGAACTTAC |
| 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP *CP*TP*TP*AP*C)-3' | i | 15 | NA | CGCGCCGGAACTTAC |
| 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP *CP*TP*TP*AP*C)-3' | n | 15 | NA | CGCGCCGGAACTTAC |
| 5'-D(*CP*CP*GP*GP*CP*AP*AP* GP*GP*CP)-3' | e | 10 | NA | CCGGCAAGGC |
| 5'-D(*CP*CP*GP*GP*CP*AP*AP* GP*GP*CP)-3' | j | 10 | NA | CCGGCAAGGC |
| 5'-D(*CP*CP*GP*GP*CP*AP*AP* GP*GP*CP)-3' | o | 10 | NA | CCGGCAAGGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2008-04-21 Deposition Author(s): Alibes, A. , Blanco, F.J. , Duchateau, P. , Grizot, S. , Marcaida, M.J. , Montoya, G. , Nadra, A.D. , Paques, F. , Prieto, J. , Redondo, P. , Serrano, L.