2VAK
Crystal structure of the avian reovirus inner capsid protein sigmaa
PDB DOI: 10.2210/pdb2vak/pdb
Classification: VIRAL PROTEIN Organism(s): Avian Orthoreovirus
Deposited: 2007-09-01 Deposition Author(s): Benavente, J. , Fox, G.C. , Guardado-Calvo, P. , Hermo-Parrado, X.L. , Llamas-Saiz, A.L. , Martinez-Costas, J. , Van Raaij, M.J. , Vazquez-Iglesias, L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.34 Å
Crystal structure of the avian reovirus inner capsid protein sigmaa
Benavente, J. , Fox, G.C. , Guardado-Calvo, P. , Hermo-Parrado, X.L. , Llamas-Saiz, A.L. , Martinez-Costas, J. , Van Raaij, M.J. , Vazquez-Iglesias, L.
Primary Citation of Related Structures: 2VAK
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| SIGMA A | A | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | B | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | C | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | D | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | E | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | F | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | G | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | H | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | I | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | J | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | K | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
| SIGMA A | L | 423 | Avian Orthoreovirus | ISEFGSTMARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMTPLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSGLVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVLYVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLWLLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPDWNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTAQECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIKPFVNGDWTPGMTAQALAVLATFTA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2007-09-01 Deposition Author(s): Benavente, J. , Fox, G.C. , Guardado-Calvo, P. , Hermo-Parrado, X.L. , Llamas-Saiz, A.L. , Martinez-Costas, J. , Van Raaij, M.J. , Vazquez-Iglesias, L.