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FASTA Sequence PDB Format mmCIF Format
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2V9W

Complex structure of sulfolobus solfataricus dpo4 and dna duplex containing a hydrophobic thymine isostere 2,4-difluorotoluene nucleotide in the template strand

PDB DOI: 10.2210/pdb2v9w/pdb

Classification: TRANSFERASE
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2007-08-27
Deposition Author(s): Egli, M. , Irimia, A. , Pallan, P.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

Literature

Complex structure of sulfolobus solfataricus dpo4 and dna duplex containing a hydrophobic thymine isostere 2,4-difluorotoluene nucleotide in the template strand

Egli, M. , Irimia, A. , Pallan, P.S.

Primary Citation of Related Structures: 2V9W


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA POLYMERASE IV A 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
DNA POLYMERASE IV B 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *CP*TP*G)-3' c 13 NA GGGGGAAGGACTG
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *CP*TP*G)-3' e 13 NA GGGGGAAGGACTG
5'-D(*TP*TP*CP*AP*GP*DFTP*AP*GP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' d 18 NA TTCAGNAGTCCTTCCCCC
5'-D(*TP*TP*CP*AP*GP*DFTP*AP*GP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' f 18 NA TTCAGNAGTCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2007-08-27
Deposition Author(s): Egli, M. , Irimia, A. , Pallan, P.S.