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FASTA Sequence PDB Format mmCIF Format
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2V4R

Non-productive complex of the y-family dna polymerase dpo4 with dgtp skipping the m1dg adduct to pair with the next template cytosine

PDB DOI: 10.2210/pdb2v4r/pdb

Classification: TRANSFERASE
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2008-09-26
Deposition Author(s): Egli, M. , Eoff, R.L. , Guengerich, F.P. , Marnett, L.J. , Rizzo, C.J. , Stafford, J.B. , Szekely, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

2v4r
Literature

Non-productive complex of the y-family dna polymerase dpo4 with dgtp skipping the m1dg adduct to pair with the next template cytosine

Egli, M. , Eoff, R.L. , Guengerich, F.P. , Marnett, L.J. , Rizzo, C.J. , Stafford, J.B. , Szekely, J.

Primary Citation of Related Structures: 2V4R


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA POLYMERASE IV A 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3' p 13 NA GGGGGAAGGATTC
5'-D(*TP*CP*AP*CP*M1GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' t 18 NA TCACGGAATCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-09-26
Deposition Author(s): Egli, M. , Eoff, R.L. , Guengerich, F.P. , Marnett, L.J. , Rizzo, C.J. , Stafford, J.B. , Szekely, J.