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2R29
Neutralization of dengue virus by a serotype cross-reactive antibody elucidated by cryoelectron microscopy and x-ray crystallography
PDB DOI: 10.2210/pdb2r29/pdb
Classification: Viral protein/Immune system Organism(s): Dengue Virus 2 Thailand/16681/84 , Mus Musculus
Deposited: 2007-08-24 Deposition Author(s): Battisti, A.J. , Chipman, P.R. , Diamond, M.S. , Fremont, D.H. , Holdaway, H.A. , Kostyuchenko, V.K. , Kuhn, R.J. , Lok, S.M. , Nybakken, G.E. , Roehrig, J.T. , Rossmann, M.G. , Sedlak, D. , Sukupolvi-Petty, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
Neutralization of dengue virus by a serotype cross-reactive antibody elucidated by cryoelectron microscopy and x-ray crystallography
Battisti, A.J. , Chipman, P.R. , Diamond, M.S. , Fremont, D.H. , Holdaway, H.A. , Kostyuchenko, V.K. , Kuhn, R.J. , Lok, S.M. , Nybakken, G.E. , Roehrig, J.T. , Rossmann, M.G. , Sedlak, D. , Sukupolvi-Petty, S.
Primary Citation of Related Structures: 2R29
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Envelope protein E | A | 97 | Dengue Virus 2 Thailand/16681/84 , Mus Musculus | SYSMCTGKFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKK |
| Heavy chain of Fab 1A1D-2 | H | 216 | Dengue Virus 2 Thailand/16681/84 , Mus Musculus | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGYSKYDPKFQGKATITADTSSNAAYLQLSSLTSEDTAVYFCARDYEGFAYWGQGTLVTVSSAKTTPPSVYPLAPGAAAATSSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQTITCNVAHPASSTKVDKKIEPR |
| Light chain of Fab 1A1D-2 | L | 217 | Dengue Virus 2 Thailand/16681/84 , Mus Musculus | DIVLTQSPASLAVSLGQRATISCRASESVVRYGNSFMHWYQQKPGQPPKLLIYRASSLESGIPTRFSGSGSRTDFTLTINPVEADDVATYYCQQTNVDPWAFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2007-08-24 Deposition Author(s): Battisti, A.J. , Chipman, P.R. , Diamond, M.S. , Fremont, D.H. , Holdaway, H.A. , Kostyuchenko, V.K. , Kuhn, R.J. , Lok, S.M. , Nybakken, G.E. , Roehrig, J.T. , Rossmann, M.G. , Sedlak, D. , Sukupolvi-Petty, S.