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FASTA Sequence PDB Format mmCIF Format
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2PY5

Phi29 dna polymerase complexed with single-stranded dna

PDB DOI: 10.2210/pdb2py5/pdb

Classification: REPLICATION, TRANSFERASE/DNA
Organism(s): Bacillus Phage Phi29 , Synthetic Construct

Deposited: 2007-05-15
Deposition Author(s): Berman, A.J. , Blanco, L. , De Vega, M. , Goodman, J.L. , Kamtekar, S. , Lazaro, J.M. , Salas, M. , Steitz, T.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.6 Å

2py5
Literature

Phi29 dna polymerase complexed with single-stranded dna

Berman, A.J. , Blanco, L. , De Vega, M. , Goodman, J.L. , Kamtekar, S. , Lazaro, J.M. , Salas, M. , Steitz, T.A.

Primary Citation of Related Structures: 2PY5


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-d(GGACTTT)-3' j 7 NA GGACTTT
5'-d(GGACTTT)-3' y 7 NA GGACTTT
5'-d(GGACTTT)-3' d 7 NA GGACTTT
5'-d(GGACTTT)-3' e 7 NA GGACTTT
5'-d(GGACTTT)-3' l 7 NA GGACTTT

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase A 575 Bacillus Phage Phi29 , Synthetic Construct MKHMPRKMYSCAFETTTKVEDCRVWAYGYMNIEDHSEYKIGNSLDEFMAWVLKVQADLYFHNLKFAGAFIINWLERNGFKWSADGLPNTYNTIISRMGQWYMIDICLGYKGKRKIHTVIYDSLKKLPFPVKKIAKDFKLTVLKGDIDYHKERPVGYKITPEEYAYIKNDIQIIAEALLIQFKQGLDRMTAGSDSLKGFKDIITTKKFKKVFPTLSLGLDKEVRYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGEPIVFEGKYVWDEDYPLHIQHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDLYNVEYISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPVYTPMGVFITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMKEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGVVLVDDTFTIK
DNA polymerase B 575 Bacillus Phage Phi29 , Synthetic Construct MKHMPRKMYSCAFETTTKVEDCRVWAYGYMNIEDHSEYKIGNSLDEFMAWVLKVQADLYFHNLKFAGAFIINWLERNGFKWSADGLPNTYNTIISRMGQWYMIDICLGYKGKRKIHTVIYDSLKKLPFPVKKIAKDFKLTVLKGDIDYHKERPVGYKITPEEYAYIKNDIQIIAEALLIQFKQGLDRMTAGSDSLKGFKDIITTKKFKKVFPTLSLGLDKEVRYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGEPIVFEGKYVWDEDYPLHIQHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDLYNVEYISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPVYTPMGVFITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMKEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGVVLVDDTFTIK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2007-05-15
Deposition Author(s): Berman, A.J. , Blanco, L. , De Vega, M. , Goodman, J.L. , Kamtekar, S. , Lazaro, J.M. , Salas, M. , Steitz, T.A.