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2OPF

Crystal structure of the dna repair enzyme endonuclease-viii (nei) from e. coli (r252a) in complex with ap-site containing dna substrate

PDB DOI: 10.2210/pdb2opf/pdb

Classification: HYDROLASE/DNA
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2007-01-29
Deposition Author(s): Golan, G. , Grollman, A.P. , Shoham, G. , Zharov, D.O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å

2opf
Literature

Crystal structure of the dna repair enzyme endonuclease-viii (nei) from e. coli (r252a) in complex with ap-site containing dna substrate

Golan, G. , Grollman, A.P. , Shoham, G. , Zharov, D.O.

Primary Citation of Related Structures: 2OPF


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*CP*TP*TP*CP*AP*TP*CP*CP*TP*G)-3' b 12 NA GGCTTCATCCTG
5'-D(P*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3' c 12 NA CAGGAXGAAGCC

Proteins
Molecule Chains Sequence Length Organism Sequence
Endonuclease VIII A 262 Escherichia Coli , Synthetic Construct PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCERCGSIIEKTTLSSAPFYWCPGCQH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2007-01-29
Deposition Author(s): Golan, G. , Grollman, A.P. , Shoham, G. , Zharov, D.O.