2NY5
Hiv-1 gp120 envelope glycoprotein (m95w, w96c, i109c, t257s, v275c, s334a, s375w, q428c, a433m) complexed with cd4 and antibody 17b
PDB DOI: 10.2210/pdb2ny5/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2006-11-20 Deposition Author(s): Arthos, J. , Burton, D.R. , Dey, B. , Dimitrov, D.S. , Hessell, A.J. , Kwong, P.D. , Nabel, G.J. , Sodroski, J. , Van Ryk, D. , Wyatt, R. , Xiang, S.H. , Xu, L. , Yang, X. , Zhang, M.Y. , Zhou, T. , Zwick, M.B.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.5 Å
Hiv-1 gp120 envelope glycoprotein (m95w, w96c, i109c, t257s, v275c, s334a, s375w, q428c, a433m) complexed with cd4 and antibody 17b
Arthos, J. , Burton, D.R. , Dey, B. , Dimitrov, D.S. , Hessell, A.J. , Kwong, P.D. , Nabel, G.J. , Sodroski, J. , Van Ryk, D. , Wyatt, R. , Xiang, S.H. , Xu, L. , Yang, X. , Zhang, M.Y. , Zhou, T. , Zwick, M.B.
Primary Citation of Related Structures: 2NY5
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ENVELOPE GLYCOPROTEIN GP120 | G | 317 | Homo Sapiens , Human Immunodeficiency Virus 1 | EVVLVNVTENFNWCKNDMVEQMHEDICSLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSSQLLLNGSLAEEEVVIRSCNFTDNAKTIIVQLNTSVEINCTGAGHCNIARAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHWFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQIINMWCKVGKMMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE |
| T-cell surface glycoprotein CD4 | C | 184 | Homo Sapiens , Human Immunodeficiency Virus 1 | MKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS |
| ANTIBODY 17B, LIGHT CHAIN | L | 214 | Homo Sapiens , Human Immunodeficiency Virus 1 | DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG |
| ANTIBODY 17B, HEAVY CHAIN | H | 229 | Homo Sapiens , Human Immunodeficiency Virus 1 | EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2006-11-20 Deposition Author(s): Arthos, J. , Burton, D.R. , Dey, B. , Dimitrov, D.S. , Hessell, A.J. , Kwong, P.D. , Nabel, G.J. , Sodroski, J. , Van Ryk, D. , Wyatt, R. , Xiang, S.H. , Xu, L. , Yang, X. , Zhang, M.Y. , Zhou, T. , Zwick, M.B.