PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

2KY8

Solution structure and dynamic analysis of chicken mbd2 methyl binding domain bound to a target methylated dna sequence

PDB DOI: 10.2210/pdb2ky8/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2010-05-18
Deposition Author(s): Scarsdale Jr., J.N. , Williams Jr., D.C.

Experimental Data Snapshot

Method: SOLUTION NMR
Resolution: N.A.

2ky8
Literature

Solution structure and dynamic analysis of chicken mbd2 methyl binding domain bound to a target methylated dna sequence

Scarsdale Jr., J.N. , Williams Jr., D.C.

Primary Citation of Related Structures: 2KY8


Proteins
Molecule Chains Sequence Length Organism Sequence
Methyl-CpG-binding domain protein 2 A 72 Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSDKQGRTDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSCFDFRTGKMM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*AP*AP*TP*(5CM)P*GP*GP*CP*(TED)P*C)-3') b 11 NA GGAATCGGCXC
DNA (5'-D(*GP*AP*GP*CP*(5CM)P*GP*AP*TP*(TED)P*CP*C)-3') c 11 NA GAGCCGATXCC
Experimental Data

Method: SOLUTION NMR

Deposited Date: 2010-05-18
Deposition Author(s): Scarsdale Jr., J.N. , Williams Jr., D.C.