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2JEI

The molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x- ray crystallography of correct and incorrect pairing

PDB DOI: 10.2210/pdb2jei/pdb

Classification: TRANSFERASE
Organism(s): Chaetomium Thermophilum Var. Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2007-01-17
Deposition Author(s): Angel, K.C. , Egli, M. , Eoff, R.L. , Guengerich, F.P. , Kosekov, I.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.39 Å

2jei
Literature

The molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x- ray crystallography of correct and incorrect pairing

Angel, K.C. , Egli, M. , Eoff, R.L. , Guengerich, F.P. , Kosekov, I.D.

Primary Citation of Related Structures: 2JEI


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA POLYMERASE IV A 358 Chaetomium Thermophilum Var. Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*T)-3' p 14 NA GGGGGAAGGATTCT
5'-D(*TP*CP*AP*C BZGP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' t 18 NA TCACNGAATCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2007-01-17
Deposition Author(s): Angel, K.C. , Egli, M. , Eoff, R.L. , Guengerich, F.P. , Kosekov, I.D.