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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

2J0Q

The crystal structure of the exon junction complex at 3.2 a resolution

PDB DOI: 10.2210/pdb2j0q/pdb

Classification: HYDROLASE
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2006-08-04
Deposition Author(s): Bono, F. , Conti, E. , Ebert, J. , Lorentzen, E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.2 Å

2j0q
Literature

The crystal structure of the exon junction complex at 3.2 a resolution

Bono, F. , Conti, E. , Ebert, J. , Lorentzen, E.

Primary Citation of Related Structures: 2J0Q


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-DEPENDENT RNA HELICASE DDX48 A 410 Homo Sapiens , Synthetic Construct ATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
ATP-DEPENDENT RNA HELICASE DDX48 B 410 Homo Sapiens , Synthetic Construct ATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
PROTEIN MAGO NASHI HOMOLOG C 146 Homo Sapiens , Synthetic Construct MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI
PROTEIN MAGO NASHI HOMOLOG F 146 Homo Sapiens , Synthetic Construct MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI
RNA-BINDING PROTEIN 8A D 109 Homo Sapiens , Synthetic Construct PQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
RNA-BINDING PROTEIN 8A G 109 Homo Sapiens , Synthetic Construct PQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
PROTEIN CASC3 I 150 Homo Sapiens , Synthetic Construct DTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQG
PROTEIN CASC3 T 150 Homo Sapiens , Synthetic Construct DTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' e 15 NA UUUUUUUUUUUUUUU
5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' h 15 NA UUUUUUUUUUUUUUU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-08-04
Deposition Author(s): Bono, F. , Conti, E. , Ebert, J. , Lorentzen, E.