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2ICW

Crystal structure of a complete ternary complex between tcr, superantigen, and peptide-mhc class ii molecule

PDB DOI: 10.2210/pdb2icw/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct

Deposited: 2006-09-13
Deposition Author(s): Li, H. , Wang, L. , Zhao, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.41 Å

Literature

Crystal structure of a complete ternary complex between tcr, superantigen, and peptide-mhc class ii molecule

Li, H. , Wang, L. , Zhao, Y.

Primary Citation of Related Structures: 2ICW


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class II histocompatibility antigen, DR alpha chain A 179 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct EEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFD
HLA class II histocompatibility antigen, DR alpha chain D 179 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct EEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFD
HLA class II histocompatibility antigen, DRB1-1 beta chain B 190 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
HLA class II histocompatibility antigen, DRB1-1 beta chain E 190 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
haemagglutinin peptide C 13 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct PKYVKQNTLKLAT
haemagglutinin peptide F 13 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct PKYVKQNTLKLAT
Mycoplasma arthritidis mitogen G 213 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct MKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLKVNQFYRHAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDEIMAKADNDLSYFISQNKNFQELWDKAVKLTKEMKIKLKGQKLDLRDGEVAINKVRELFGSDKNVKELWWFRSLLVKGVYLIKRYYEGDIELKTTSDFAKAVFED
Mycoplasma arthritidis mitogen H 213 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct MKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLKVNQFYRHAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDEIMAKADNDLSYFISQNKNFQELWDKAVKLTKEMKIKLKGQKLDLRDGEVAINKVRELFGSDKNVKELWWFRSLLVKGVYLIKRYYEGDIELKTTSDFAKAVFED
T-cell receptor alpha chain V I 110 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQLLLKYYSGDPVVQGVNGFEAEFSKSNSSFHLRKASVHRSDSAVYFCAVSGFASALTFGSGTKVIVL
T-cell receptor alpha chain V K 110 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQLLLKYYSGDPVVQGVNGFEAEFSKSNSSFHLRKASVHRSDSAVYFCAVSGFASALTFGSGTKVIVL
T-cell receptor beta chain V J 113 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct EAAVTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHELRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILESATPSQTSVYFCASGGGGTLYFGAGTRLSVLSSA
T-cell receptor beta chain V L 113 Homo Sapiens , Mus Musculus , Mycoplasma Arthritidis , Synthetic Construct EAAVTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHELRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILESATPSQTSVYFCASGGGGTLYFGAGTRLSVLSSA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-09-13
Deposition Author(s): Li, H. , Wang, L. , Zhao, Y.