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2I60

Crystal structure of [phe23]m47, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b

PDB DOI: 10.2210/pdb2i60/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct

Deposited: 2006-08-26
Deposition Author(s): Huang, C.-C. , Kwong, P.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

2i60
Literature

Crystal structure of [phe23]m47, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b

Huang, C.-C. , Kwong, P.D.

Primary Citation of Related Structures: 2I60


Proteins
Molecule Chains Sequence Length Organism Sequence
EXTERIOR MEMBRANE GLYCOPROTEIN(GP120) G 313 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct GARSEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE
EXTERIOR MEMBRANE GLYCOPROTEIN(GP120) P 313 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct GARSEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE
ANTIBODY 17B LIGHT CHAIN L 214 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
ANTIBODY 17B LIGHT CHAIN Q 214 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
ANTIBODY 17B HEAVY CHAIN H 229 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
ANTIBODY 17B HEAVY CHAIN R 229 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
[PHE23]M47, SCORPION-TOXIN MIMIC OF CD4 M 27 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct XNLHFCQLRCKSLGLLGRCAPTFCACX
[PHE23]M47, SCORPION-TOXIN MIMIC OF CD4 S 27 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct XNLHFCQLRCKSLGLLGRCAPTFCACX
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-08-26
Deposition Author(s): Huang, C.-C. , Kwong, P.D.