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FASTA Sequence PDB Format mmCIF Format
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2HYI

Structure of the human exon junction complex with a trapped dead-box helicase bound to rna

PDB DOI: 10.2210/pdb2hyi/pdb

Classification: hydrolase/RNA binding protein/RNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2006-08-06
Deposition Author(s): Andersen, C.B.F. , Andersen, G.R. , Le Hir, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

2hyi
Literature

Structure of the human exon junction complex with a trapped dead-box helicase bound to rna

Andersen, C.B.F. , Andersen, G.R. , Le Hir, H.

Primary Citation of Related Structures: 2HYI


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-R(*UP*UP*UP*UP*UP*U)-3' f 6 NA UUUUUU
5'-R(*UP*UP*UP*UP*UP*U)-3' l 6 NA UUUUUU

Proteins
Molecule Chains Sequence Length Organism Sequence
Protein mago nashi homolog A 146 Homo Sapiens , Synthetic Construct MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI
Protein mago nashi homolog G 146 Homo Sapiens , Synthetic Construct MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI
RNA-binding protein 8A B 91 Homo Sapiens , Synthetic Construct PGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGP
RNA-binding protein 8A H 91 Homo Sapiens , Synthetic Construct PGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGP
Probable ATP-dependent RNA helicase DDX48 C 413 Homo Sapiens , Synthetic Construct MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLILE
Probable ATP-dependent RNA helicase DDX48 I 413 Homo Sapiens , Synthetic Construct MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLILE
Protein CASC3 D 77 Homo Sapiens , Synthetic Construct LDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRS
Protein CASC3 J 77 Homo Sapiens , Synthetic Construct LDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-08-06
Deposition Author(s): Andersen, C.B.F. , Andersen, G.R. , Le Hir, H.