2HPC
Crystal structure of fragment d from human fibrinogen complexed with gly-pro-arg-pro-amide.
PDB DOI: 10.2210/pdb2hpc/pdb
Classification: BLOOD CLOTTING Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2006-07-17 Deposition Author(s): Chen, A. , Doolittle, R.F. , Kollman, J.M. , Pandi, L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Crystal structure of fragment d from human fibrinogen complexed with gly-pro-arg-pro-amide.
Chen, A. , Doolittle, R.F. , Kollman, J.M. , Pandi, L.
Primary Citation of Related Structures: 2HPC
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fibrinogen alpha chain | A | 87 | Homo Sapiens , Synthetic Construct | VSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSR |
| Fibrinogen alpha chain | D | 87 | Homo Sapiens , Synthetic Construct | VSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSR |
| Fibrinogen alpha chain | G | 87 | Homo Sapiens , Synthetic Construct | VSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSR |
| Fibrinogen alpha chain | J | 87 | Homo Sapiens , Synthetic Construct | VSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSR |
| Fibrinogen beta chain | B | 328 | Homo Sapiens , Synthetic Construct | DNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKMSMKIRPFFPQQ |
| Fibrinogen beta chain | E | 328 | Homo Sapiens , Synthetic Construct | DNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKMSMKIRPFFPQQ |
| Fibrinogen beta chain | H | 328 | Homo Sapiens , Synthetic Construct | DNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKMSMKIRPFFPQQ |
| Fibrinogen beta chain | K | 328 | Homo Sapiens , Synthetic Construct | DNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKMSMKIRPFFPQQ |
| Fibrinogen, gamma polypeptide | C | 323 | Homo Sapiens , Synthetic Construct | MLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV |
| Fibrinogen, gamma polypeptide | F | 323 | Homo Sapiens , Synthetic Construct | MLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV |
| Fibrinogen, gamma polypeptide | I | 323 | Homo Sapiens , Synthetic Construct | MLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV |
| Fibrinogen, gamma polypeptide | L | 323 | Homo Sapiens , Synthetic Construct | MLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV |
| Gly-Pro-Arg-Pro-amide peptide ligand | M | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
| Gly-Pro-Arg-Pro-amide peptide ligand | N | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
| Gly-Pro-Arg-Pro-amide peptide ligand | O | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
| Gly-Pro-Arg-Pro-amide peptide ligand | P | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
| Gly-Pro-Arg-Pro-amide peptide ligand | Q | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
| Gly-Pro-Arg-Pro-amide peptide ligand | R | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
| Gly-Pro-Arg-Pro-amide peptide ligand | S | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
| Gly-Pro-Arg-Pro-amide peptide ligand | T | 5 | Homo Sapiens , Synthetic Construct | GPRPX |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2006-07-17 Deposition Author(s): Chen, A. , Doolittle, R.F. , Kollman, J.M. , Pandi, L.