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2FMS

Dna polymerase beta with a gapped dna substrate and dumpnpp with magnesium in the catalytic site

PDB DOI: 10.2210/pdb2fms/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2006-01-09
Deposition Author(s): Batra, V.K. , Beard, W.A. , Krahn, J.M. , Pedersen, L.C. , Shock, D.D. , Wilson, S.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

2fms
Literature

Dna polymerase beta with a gapped dna substrate and dumpnpp with magnesium in the catalytic site

Batra, V.K. , Beard, W.A. , Krahn, J.M. , Pedersen, L.C. , Shock, D.D. , Wilson, S.H.

Primary Citation of Related Structures: 2FMS


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3' t 16 NA CCGACAGCGCATCAGC
5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3' p 10 NA GCTGATGCGC
5'-D(P*GP*TP*CP*GP*G)-3' d 5 NA GTCGG

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 335 Homo Sapiens , Synthetic Construct MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-01-09
Deposition Author(s): Batra, V.K. , Beard, W.A. , Krahn, J.M. , Pedersen, L.C. , Shock, D.D. , Wilson, S.H.