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2DLC

Crystal structure of the ternary complex of yeast tyrosyl-trna synthetase

PDB DOI: 10.2210/pdb2dlc/pdb

Classification: LIGASE/tRNA
Organism(s): Grouper Iridovirus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2006-04-18
Deposition Author(s): Kusakabe, Y. , Nakamura, K.T. , Tanaka, N. , Tsunoda, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

2dlc
Literature

Crystal structure of the ternary complex of yeast tyrosyl-trna synthetase

Kusakabe, Y. , Nakamura, K.T. , Tanaka, N. , Tsunoda, M.

Primary Citation of Related Structures: 2DLC


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
T-RNA (76-MER) y 76 NA CUCUCGGUAGCCAAGUUGGGAAGGCGCAAGACUGUAAAUCUUGAGGUCGGGCGUUCGACUCGCCCCCGGGAGACCA

Proteins
Molecule Chains Sequence Length Organism Sequence
Tyrosyl-tRNA synthetase, cytoplasmic X 394 Grouper Iridovirus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSSAATVDPNEAFGLITKNLQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRPHCGYFVPMTKLADFLKAGCEVTVLLADLHAFLDNMKAPLEVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLTPDYTMDIFRLSNIVSQNDAKRAGADVVKQVANPLLSGLIYPLMQALDEQFLDVDCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNSKIDLLEEPKQVKKKINSAFCSPGNVEENGLLSFVQYVIAPIQELKFGTNHFEFFIDRPEKFGGPITYKSFEEMKLAFKEEKLSPPDLKIGVADAINELLEPIRQEFANNKEFQEASEKGYPVATPQKSKKAKKPKNKGTKYPGATKTNEIATKLEETKL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-04-18
Deposition Author(s): Kusakabe, Y. , Nakamura, K.T. , Tanaka, N. , Tsunoda, M.