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FASTA Sequence PDB Format mmCIF Format
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2CMR

Crystal structure of the hiv-1 neutralizing antibody d5 fab bound to the gp41 inner-core mimetic 5-helix

PDB DOI: 10.2210/pdb2cmr/pdb

Classification: IMMUNE SYSTEM
Organism(s): Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Escherichia Coli Kte5

Deposited: 2006-05-11
Deposition Author(s): Barbato, G. , Bianchi, E. , Carfi, A. , Di Giovine, P. , Geleziunas, R. , Hrin, R. , Luftig, M.A. , Mattu, M. , Miller, M.D. , Pessi, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

Literature

Crystal structure of the hiv-1 neutralizing antibody d5 fab bound to the gp41 inner-core mimetic 5-helix

Barbato, G. , Bianchi, E. , Carfi, A. , Di Giovine, P. , Geleziunas, R. , Hrin, R. , Luftig, M.A. , Mattu, M. , Miller, M.D. , Pessi, A.

Primary Citation of Related Structures: 2CMR


Proteins
Molecule Chains Sequence Length Organism Sequence
TRANSMEMBRANE GLYCOPROTEIN A 226 Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Escherichia Coli Kte5 MQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAGGSGGHTTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLEGSSGGQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAGGSGGHTTWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLEGSSGGQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAGGHHHHHHG
D5 H 217 Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Escherichia Coli Kte5 QVQLVQSGAEVRKPGASVKVSCKASGDTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQAFQGRVTITANESTSTAYMELSSLRSEDTAIYYCARDNPTLLGSDYWGAGTLVTVSSASTKGPSVFPLAPCSRSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRV
D5 L 208 Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Escherichia Coli Kte5 DIQMTQSPSTLSASIGDRVTITCRASEGIYHWLAWYQQKPGKAPKLLIYKASSLASGAPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQYSNYPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2006-05-11
Deposition Author(s): Barbato, G. , Bianchi, E. , Carfi, A. , Di Giovine, P. , Geleziunas, R. , Hrin, R. , Luftig, M.A. , Mattu, M. , Miller, M.D. , Pessi, A.