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2C2E

Efficient and high fidelity incorporation of dctp opposite 7,8- dihydro-8-oxodeoxyguanosine by sulfolobus solfataricus dna polymerase dpo4

PDB DOI: 10.2210/pdb2c2e/pdb

Classification: POLYMERASE
Organism(s): Chaetomium Thermophilum Var. Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2005-09-27
Deposition Author(s): Egli, M. , Irimia, A. , Loukachevitch, L.V.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.61 Å

2c2e
Literature

Efficient and high fidelity incorporation of dctp opposite 7,8- dihydro-8-oxodeoxyguanosine by sulfolobus solfataricus dna polymerase dpo4

Egli, M. , Irimia, A. , Loukachevitch, L.V.

Primary Citation of Related Structures: 2C2E


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA POLYMERASE IV A 358 Chaetomium Thermophilum Var. Thermophilum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*C)-3' p 14 NA GGGGGAAGGATTCC
5'-D(*TP*CP*AP*C 8OGP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' t 18 NA TCACGGAATCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2005-09-27
Deposition Author(s): Egli, M. , Irimia, A. , Loukachevitch, L.V.