2BNR
Structural and kinetic basis for heightened immunogenicity of t cell vaccines
PDB DOI: 10.2210/pdb2bnr/pdb
Classification: IMMUNE SYSTEM/RECEPTOR Organism(s): Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2005-03-31 Deposition Author(s): Bossi, G. , Boultier, J.M. , Cerundolo, V. , Chen, J.-L. , Choi, E.M.L. , Dunbar, P.R. , Esnouf, R.M. , Griffiths, G. , Held, G. , Jackobsen, B.K. , Jones, E.Y. , Lissin, N.M. , Renner, C. , Rizkallah, P.J. , Sami, M. , Sewell, A. , Stewart-Jones, G. , Van Der Merwe, P.A. , Wooldridge, L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.9 Å
Structural and kinetic basis for heightened immunogenicity of t cell vaccines
Bossi, G. , Boultier, J.M. , Cerundolo, V. , Chen, J.-L. , Choi, E.M.L. , Dunbar, P.R. , Esnouf, R.M. , Griffiths, G. , Held, G. , Jackobsen, B.K. , Jones, E.Y. , Lissin, N.M. , Renner, C. , Rizkallah, P.J. , Sami, M. , Sewell, A. , Stewart-Jones, G. , Van Der Merwe, P.A. , Wooldridge, L.
Primary Citation of Related Structures: 2BNR
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HLA CLASS I HISTOCOMPATIBILITY ANTIGEN | A | 276 | Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWEP |
| BETA-2-MICROGLOBULIN | B | 100 | Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| SYNTHETIC PEPTIDE | C | 9 | Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SLLMWITQC |
| T-CELL RECEPTOR ALPHA CHAIN V REGION | D | 203 | Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QEVTQIPAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSATYLCAVRPTSGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPS |
| T-CELL RECEPTOR BETA CHAIN C REGION | E | 241 | Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPNGYNVSRSTTEDFPLRLLSAAPSQTSVYFCASSYVGNTGELFFGEGSRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2005-03-31 Deposition Author(s): Bossi, G. , Boultier, J.M. , Cerundolo, V. , Chen, J.-L. , Choi, E.M.L. , Dunbar, P.R. , Esnouf, R.M. , Griffiths, G. , Held, G. , Jackobsen, B.K. , Jones, E.Y. , Lissin, N.M. , Renner, C. , Rizkallah, P.J. , Sami, M. , Sewell, A. , Stewart-Jones, G. , Van Der Merwe, P.A. , Wooldridge, L.