2B9S
Crystal structure of heterodimeric l. donovani topoisomerase i-vanadate-dna complex
PDB DOI: 10.2210/pdb2b9s/pdb
Classification: ISOMERASE/DNA Organism(s): Methanosarcina Acetivorans C2A , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2005-10-12 Deposition Author(s): Davies, D.R. , Hol, W.G.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.27 Å
Crystal structure of heterodimeric l. donovani topoisomerase i-vanadate-dna complex
Primary Citation of Related Structures: 2B9S
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*T)-3' | c | 10 | NA | AAAAAGACTT |
| 5'-D(*AP*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3' | d | 12 | NA | AGAAAAATTTTT |
| 5'-D(*AP*AP*AP*AP*AP*TP*TP*TP*TP*TP*CP*TP*AP*AP*GP*TP*CP*TP*TP*TP*TP*T)-3' | e | 22 | NA | AAAAATTTTTCTAAGTCTTTTT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| topoisomerase I-like protein | A | 432 | Methanosarcina Acetivorans C2A , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | EEDLNWWEQENLRIAMKGERRWETLAHNGVLFPPEYEPHGIPIFYDGREFKMTPEEEEVATMFAVMKEHDYYRMEVFRRNFFESWREILDKRQHPIRRLELCDFEPIYQWHLVQREKKLSRTKEEKKAIKEKQDAEAEPYRYCVWDGRREQVANFRVEPPGLFRGRGKHPLMGKLKVRVQPEDITINIGETAEVPVPPAGHKWAAVQHDHTVTWLAMWRDSVAGNMKYVMLAPSSSVKGQSDMVKFEKARKLKDKVDDIRASYMEDFKSNDLHVAQRAVAMYFIDRLALRVGNEKGEDEADTVGCCSLRVEHIQLMPDNIVRFDFLGKDSIRYQNDVAVLPEVYALLQRFTRRKSPGMDIFDQLNPTQLNDHLKSFMDGLSAKVFRTYNASITLDRWFKEKPVDPKWSTADKLAYFNKANTEVAILCNHQKS |
| DNA topoisomerase I-like protein | B | 62 | Methanosarcina Acetivorans C2A , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | ENIIRIKDDNKAVSLGTSKINYIDPRIICSWAKAQDVPINKIFSATIQKKFPWAMNAENFDF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2005-10-12 Deposition Author(s): Davies, D.R. , Hol, W.G.J.