2AKI
Normal mode-based flexible fitted coordinates of a translocating secyeg protein-conducting channel into the cryo-em map of a secyeg-nascent chain-70s ribosome complex from e. coli
PDB DOI: 10.2210/pdb2aki/pdb
Classification: PROTEIN TRANSPORT Organism(s): Escherichia Coli
Deposited: 2005-08-03 Deposition Author(s): Ban, N. , Brooks Iii, C.L. , Frank, J. , Jenni, S. , Mitra, K. , Schaffitzel, C. , Shaikh, T. , Tama, F.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 14.9 Å
Normal mode-based flexible fitted coordinates of a translocating secyeg protein-conducting channel into the cryo-em map of a secyeg-nascent chain-70s ribosome complex from e. coli
Ban, N. , Brooks Iii, C.L. , Frank, J. , Jenni, S. , Mitra, K. , Schaffitzel, C. , Shaikh, T. , Tama, F.
Primary Citation of Related Structures: 2AKI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Protein-export membrane protein secG | X | 77 | Escherichia Coli | MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK |
| Protein-export membrane protein secG | A | 77 | Escherichia Coli | MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNK |
| Preprotein translocase secY subunit | Y | 400 | Escherichia Coli | MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFISIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKA |
| Preprotein translocase secY subunit | B | 400 | Escherichia Coli | MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFISIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKA |
| Preprotein translocase secE subunit | Z | 111 | Escherichia Coli | MKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF |
| Preprotein translocase secE subunit | C | 111 | Escherichia Coli | MKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2005-08-03 Deposition Author(s): Ban, N. , Brooks Iii, C.L. , Frank, J. , Jenni, S. , Mitra, K. , Schaffitzel, C. , Shaikh, T. , Tama, F.