Cryo-em structure of the clpe/clpp degradation complex from e.faecalis
PDB DOI: 10.2210/pdb29hb/pdb
Classification: CHAPERONE Organism(s): Enterobacter
Deposited: 2026-03-11 Deposition Author(s): Carroni, M. , Mogk, A.
Cryo-em structure of the clpe/clpp degradation complex from e.faecalis
Primary Citation of Related Structures: 29HB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ATP-dependent Clp protease, ATP-binding subunit ClpE | A | 746 | Enterobacter | MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPPTQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSNRYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEETPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPTGVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKALSKENLMNIVSLMLEEVNSLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAALDNEGKIIVTGAQEVTKTETSTSDQAE |
| ATP-dependent Clp protease, ATP-binding subunit ClpE | B | 746 | Enterobacter | MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPPTQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSNRYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEETPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPTGVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKALSKENLMNIVSLMLEEVNSLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAALDNEGKIIVTGAQEVTKTETSTSDQAE |
| ATP-dependent Clp protease, ATP-binding subunit ClpE | C | 746 | Enterobacter | MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPPTQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSNRYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEETPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPTGVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKALSKENLMNIVSLMLEEVNSLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAALDNEGKIIVTGAQEVTKTETSTSDQAE |
| ATP-dependent Clp protease, ATP-binding subunit ClpE | D | 746 | Enterobacter | MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPPTQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSNRYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEETPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPTGVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKALSKENLMNIVSLMLEEVNSLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAALDNEGKIIVTGAQEVTKTETSTSDQAE |
| ATP-dependent Clp protease, ATP-binding subunit ClpE | E | 746 | Enterobacter | MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPPTQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSNRYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEETPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPTGVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKALSKENLMNIVSLMLEEVNSLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAALDNEGKIIVTGAQEVTKTETSTSDQAE |
| ATP-dependent Clp protease, ATP-binding subunit ClpE | F | 746 | Enterobacter | MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPPTQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSNRYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEETPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPTGVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKALSKENLMNIVSLMLEEVNSLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAALDNEGKIIVTGAQEVTKTETSTSDQAE |
| ATP-dependent Clp protease proteolytic subunit | G | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| ATP-dependent Clp protease proteolytic subunit | I | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| ATP-dependent Clp protease proteolytic subunit | K | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| ATP-dependent Clp protease proteolytic subunit | L | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| ATP-dependent Clp protease proteolytic subunit | M | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| ATP-dependent Clp protease proteolytic subunit | N | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| ATP-dependent Clp protease proteolytic subunit | S | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| ATP-dependent Clp protease proteolytic subunit | T | 197 | Enterobacter | MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSALN |
| unknown substrate bound to ClpE/ClpP | H | 16 | Enterobacter | XXXXXXXXXXXXXXXX |
Method: ELECTRON MICROSCOPY
Deposited Date: 2026-03-11 Deposition Author(s): Carroni, M. , Mogk, A.