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FASTA Sequence PDB Format mmCIF Format
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24XI

Crystal structure of the diaminopimelate dehydrogenase from pyrococcus sp. in its holo form

PDB DOI: 10.2210/pdb24xi/pdb

Classification: OXIDOREDUCTASE
Organism(s): Pyrococcus Sp.

Deposited: 2026-03-23
Deposition Author(s): Bezsudnova, E.Y. , Boyko, K.M. , Matyuta, I.O. , Popov, V.O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.9 Å

24xi
Literature

Crystal structure of the diaminopimelate dehydrogenase from pyrococcus sp. in its holo form

Bezsudnova, E.Y. , Boyko, K.M. , Matyuta, I.O. , Popov, V.O.

Primary Citation of Related Structures: 24XI


Proteins
Molecule Chains Sequence Length Organism Sequence
Diaminopimelate dehydrogenase A 311 Pyrococcus Sp. MSEKIKIGIIGFGNVGQYAYLGVEEQKDMKVRGIFVRDVQKYKEKYNAKYPKACELMYSLTEIPSVKEELDVCLLCIPSRLVPETTSSLLKLGMNTVDSYDIHDKIWEYKEKATSIAKEHNSVAVISAGWDPGTDSIIRFLMELIAPNGITFTNFGPGMSMGHSTALKAFEEVVDAVSYTIPKGNGLHMRLVYVLPKENADRKTLEQKIKQDSYFVHDETRVKFVSTYKELERVKSEGHGVLLERYGKTIGSPNQVLKFDIKVNNPATTAQVMVSSARATMKLPPGAYTLLEIPLITLVDSPPEEIIKRLY
Diaminopimelate dehydrogenase B 311 Pyrococcus Sp. MSEKIKIGIIGFGNVGQYAYLGVEEQKDMKVRGIFVRDVQKYKEKYNAKYPKACELMYSLTEIPSVKEELDVCLLCIPSRLVPETTSSLLKLGMNTVDSYDIHDKIWEYKEKATSIAKEHNSVAVISAGWDPGTDSIIRFLMELIAPNGITFTNFGPGMSMGHSTALKAFEEVVDAVSYTIPKGNGLHMRLVYVLPKENADRKTLEQKIKQDSYFVHDETRVKFVSTYKELERVKSEGHGVLLERYGKTIGSPNQVLKFDIKVNNPATTAQVMVSSARATMKLPPGAYTLLEIPLITLVDSPPEEIIKRLY
Diaminopimelate dehydrogenase C 311 Pyrococcus Sp. MSEKIKIGIIGFGNVGQYAYLGVEEQKDMKVRGIFVRDVQKYKEKYNAKYPKACELMYSLTEIPSVKEELDVCLLCIPSRLVPETTSSLLKLGMNTVDSYDIHDKIWEYKEKATSIAKEHNSVAVISAGWDPGTDSIIRFLMELIAPNGITFTNFGPGMSMGHSTALKAFEEVVDAVSYTIPKGNGLHMRLVYVLPKENADRKTLEQKIKQDSYFVHDETRVKFVSTYKELERVKSEGHGVLLERYGKTIGSPNQVLKFDIKVNNPATTAQVMVSSARATMKLPPGAYTLLEIPLITLVDSPPEEIIKRLY
Diaminopimelate dehydrogenase D 311 Pyrococcus Sp. MSEKIKIGIIGFGNVGQYAYLGVEEQKDMKVRGIFVRDVQKYKEKYNAKYPKACELMYSLTEIPSVKEELDVCLLCIPSRLVPETTSSLLKLGMNTVDSYDIHDKIWEYKEKATSIAKEHNSVAVISAGWDPGTDSIIRFLMELIAPNGITFTNFGPGMSMGHSTALKAFEEVVDAVSYTIPKGNGLHMRLVYVLPKENADRKTLEQKIKQDSYFVHDETRVKFVSTYKELERVKSEGHGVLLERYGKTIGSPNQVLKFDIKVNNPATTAQVMVSSARATMKLPPGAYTLLEIPLITLVDSPPEEIIKRLY
Diaminopimelate dehydrogenase E 311 Pyrococcus Sp. MSEKIKIGIIGFGNVGQYAYLGVEEQKDMKVRGIFVRDVQKYKEKYNAKYPKACELMYSLTEIPSVKEELDVCLLCIPSRLVPETTSSLLKLGMNTVDSYDIHDKIWEYKEKATSIAKEHNSVAVISAGWDPGTDSIIRFLMELIAPNGITFTNFGPGMSMGHSTALKAFEEVVDAVSYTIPKGNGLHMRLVYVLPKENADRKTLEQKIKQDSYFVHDETRVKFVSTYKELERVKSEGHGVLLERYGKTIGSPNQVLKFDIKVNNPATTAQVMVSSARATMKLPPGAYTLLEIPLITLVDSPPEEIIKRLY
Diaminopimelate dehydrogenase F 311 Pyrococcus Sp. MSEKIKIGIIGFGNVGQYAYLGVEEQKDMKVRGIFVRDVQKYKEKYNAKYPKACELMYSLTEIPSVKEELDVCLLCIPSRLVPETTSSLLKLGMNTVDSYDIHDKIWEYKEKATSIAKEHNSVAVISAGWDPGTDSIIRFLMELIAPNGITFTNFGPGMSMGHSTALKAFEEVVDAVSYTIPKGNGLHMRLVYVLPKENADRKTLEQKIKQDSYFVHDETRVKFVSTYKELERVKSEGHGVLLERYGKTIGSPNQVLKFDIKVNNPATTAQVMVSSARATMKLPPGAYTLLEIPLITLVDSPPEEIIKRLY
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2026-03-23
Deposition Author(s): Bezsudnova, E.Y. , Boyko, K.M. , Matyuta, I.O. , Popov, V.O.