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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

22XC

Structure of cxcr4 in complex with a de-novo designed mini-protein antagonist

PDB DOI: 10.2210/pdb22xc/pdb

Classification: SIGNALING PROTEIN
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2026-01-26
Deposition Author(s): Baker, D. , Banerjee, N. , Banerjee, R. , Ganguly, M. , Muratspahic, E. , Shukla, A.K. , Tiwari, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.28 Å

Literature

Structure of cxcr4 in complex with a de-novo designed mini-protein antagonist

Baker, D. , Banerjee, N. , Banerjee, R. , Ganguly, M. , Muratspahic, E. , Shukla, A.K. , Tiwari, D.

Primary Citation of Related Structures: 22XC


Proteins
Molecule Chains Sequence Length Organism Sequence
dCX001 binder antagonist A 87 Homo Sapiens , Synthetic Construct MSGMVLKAVSMPTGIYSKLKKEYGEEIEKKAKELGVKISYGYRNGEMLIGFSGKKEEVDKLVKYVKKIVTEISRKRNGSLEHHHHHH
dCX001 binder antagonist B 87 Homo Sapiens , Synthetic Construct MSGMVLKAVSMPTGIYSKLKKEYGEEIEKKAKELGVKISYGYRNGEMLIGFSGKKEEVDKLVKYVKKIVTEISRKRNGSLEHHHHHH
dCX001 binder antagonist D 87 Homo Sapiens , Synthetic Construct MSGMVLKAVSMPTGIYSKLKKEYGEEIEKKAKELGVKISYGYRNGEMLIGFSGKKEEVDKLVKYVKKIVTEISRKRNGSLEHHHHHH
C-X-C chemokine receptor type 4 C 408 Homo Sapiens , Synthetic Construct MGKTIIALSYIFCLVFADYKDDDDAANFTPVNGSSGNQSVRLVTSSSLEVLFQGPGSEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
C-X-C chemokine receptor type 4 G 408 Homo Sapiens , Synthetic Construct MGKTIIALSYIFCLVFADYKDDDDAANFTPVNGSSGNQSVRLVTSSSLEVLFQGPGSEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
C-X-C chemokine receptor type 4 R 408 Homo Sapiens , Synthetic Construct MGKTIIALSYIFCLVFADYKDDDDAANFTPVNGSSGNQSVRLVTSSSLEVLFQGPGSEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2026-01-26
Deposition Author(s): Baker, D. , Banerjee, N. , Banerjee, R. , Ganguly, M. , Muratspahic, E. , Shukla, A.K. , Tiwari, D.