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1ZDK

Structure of bacteriophage coat protein-loop rna complex

PDB DOI: 10.2210/pdb1zdk/pdb

Classification: Virus/RNA
Organism(s): Influenza A Virus (A/New Caledonia/20/1999(H1N1)) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 1998-12-04
Deposition Author(s): Grahn, E. , Liljas, L. , Stonehouse, N.J. , Valegard, K. , Vandenworm, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.86 Å

1zdk
Literature

Structure of bacteriophage coat protein-loop rna complex

Grahn, E. , Liljas, L. , Stonehouse, N.J. , Valegard, K. , Vandenworm, S.

Primary Citation of Related Structures: 1ZDK


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3') r 19 NA ACAUGAGGAUCACCCAUGU
RNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3') s 19 NA ACAUGAGGAUCACCCAUGU

Proteins
Molecule Chains Sequence Length Organism Sequence
PROTEIN (MS2 PROTEIN CAPSID) A 129 Influenza A Virus (A/New Caledonia/20/1999(H1N1)) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
PROTEIN (MS2 PROTEIN CAPSID) B 129 Influenza A Virus (A/New Caledonia/20/1999(H1N1)) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
PROTEIN (MS2 PROTEIN CAPSID) C 129 Influenza A Virus (A/New Caledonia/20/1999(H1N1)) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 1998-12-04
Deposition Author(s): Grahn, E. , Liljas, L. , Stonehouse, N.J. , Valegard, K. , Vandenworm, S.