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1ZC8

Coordinates of tmrna, smpb, ef-tu and h44 fitted into cryo-em map of the 70s ribosome and tmrna complex

PDB DOI: 10.2210/pdb1zc8/pdb

Classification: RNA binding protein/RNA
Organism(s): Thermus Thermophilus

Deposited: 2005-04-11
Deposition Author(s): Frank, J. , Gillet, R. , Henne, A. , Kaur, S. , Ramakrishnan, V. , Valle, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 13.0 Å

1zc8
Literature

Coordinates of tmrna, smpb, ef-tu and h44 fitted into cryo-em map of the 70s ribosome and tmrna complex

Frank, J. , Gillet, R. , Henne, A. , Kaur, S. , Ramakrishnan, V. , Valle, M.

Primary Citation of Related Structures: 1ZC8


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
TLD 16S ribosomal RNA a 59 NA GGGGCUGAUUCUGGAUUCGACGGGAUAUUUCGGACGCGGGUUCAACUCCCGCCAGCUCC
H2 16S rRNA b 16 NA UUGCGAAACAUGUAGG
H2b d mRNA c 31 NA CCCAAGGUGCAUGCGCAUGUAGUACCGAGGA
protein kinase 4 mRNA g 30 NA CGAGGGGCGGUUGGCCUCGUAAAAAGCCGC
H5 16S ribosomal RNA f 29 NA CUUUAGCAGCUUAAUAACCUGCUUAGAGC
protein kinase 2 mRNA h 59 NA CCUCUCUCCCUAGCCUCCGCUCUUAGGACGGGGAUCAAGAGAGGUCAAACCCAAAAGAG
protein kinase 3 i 49 NA AUCGCGUGGAAGCCCUGCCUGGGGUUGAAGCGUUAAAACUUAAUCAGGC
protein kinase 4 mRNA j 52 NA GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGCGAAUGUAAAGACUGAC
H44 16S ribosomal RNA z 91 NA GCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUC

Proteins
Molecule Chains Sequence Length Organism Sequence
SsrA-binding protein K 130 Thermus Thermophilus GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREKGTVSFKDSFVRIENGEAWLYNLYIAPYKHATIENHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKL
Elongation factor Tu Y 405 Thermus Thermophilus AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2005-04-11
Deposition Author(s): Frank, J. , Gillet, R. , Henne, A. , Kaur, S. , Ramakrishnan, V. , Valle, M.