1Z5L
Structure of a highly potent short-chain galactosyl ceramide agonist bound to cd1d
PDB DOI: 10.2210/pdb1z5l/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus
Deposited: 2005-03-18 Deposition Author(s): Bendelac, A. , Cantu, C. , Mattner, J. , Savage, P.B. , Teyton, L. , Wilson, I.A. , Zajonc, D.M. , Zhou, D.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.2 Å
Structure of a highly potent short-chain galactosyl ceramide agonist bound to cd1d
Bendelac, A. , Cantu, C. , Mattner, J. , Savage, P.B. , Teyton, L. , Wilson, I.A. , Zajonc, D.M. , Zhou, D.
Primary Citation of Related Structures: 1Z5L
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| T-cell surface glycoprotein CD1d antigen | A | 285 | Mus Musculus | SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWHHHHHH |
| T-cell surface glycoprotein CD1d antigen | C | 285 | Mus Musculus | SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWHHHHHH |
| Beta-2-microglobulin | B | 99 | Mus Musculus | IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM |
| Beta-2-microglobulin | D | 99 | Mus Musculus | IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2005-03-18 Deposition Author(s): Bendelac, A. , Cantu, C. , Mattner, J. , Savage, P.B. , Teyton, L. , Wilson, I.A. , Zajonc, D.M. , Zhou, D.