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1Z1B

Crystal structure of a lambda integrase dimer bound to a coc' core site

PDB DOI: 10.2210/pdb1z1b/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Treponema Pallidum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2005-03-03
Deposition Author(s): Aihara, H. , Biswas, T. , Ellenberger, T. , Filman, D. , Landy, A. , Radman-Livaja, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.8 Å

1z1b
Literature

Crystal structure of a lambda integrase dimer bound to a coc' core site

Aihara, H. , Biswas, T. , Ellenberger, T. , Filman, D. , Landy, A. , Radman-Livaja, M.

Primary Citation of Related Structures: 1Z1B


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*T*CP*GP*TP*TP*CP*AP*GP*CP*TP*TP*TP*TP*TP*T)-3' c 14 NA CGTTCAGCTTTTTT
5'-D(*TP*TP*TP*AP*TP*AP*CP*TP*AP*AP*GP*TP*TP*GP*GP*CP*AP*T)-3' d 18 NA TTTATACTAAGTTGGCAT
29-MER DNA e 29 NA ATGCCAACTTAGTATAAAAAAGCTGAACG
26-MER DNA f 26 NA ACAGGTCACTATCAGTCAAAATACCG
26-MER DNA g 26 NA CGGTATTTTGACTGATAGTGACCTGT

Proteins
Molecule Chains Sequence Length Organism Sequence
Integrase A 356 Treponema Pallidum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSKVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
Integrase B 356 Treponema Pallidum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSKVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2005-03-03
Deposition Author(s): Aihara, H. , Biswas, T. , Ellenberger, T. , Filman, D. , Landy, A. , Radman-Livaja, M.