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1YF3

T4dam in complex with adohcy and 13-mer oligonucleotide making non- and semi-specific (~1/4) contact

PDB DOI: 10.2210/pdb1yf3/pdb

Classification: Transferase/DNA
Organism(s): Enterobacteria Phage T4 , Synthetic Construct

Deposited: 2004-12-30
Deposition Author(s): Cheng, X. , Hattman, S. , Horton, J.R. , Jeltsch, A. , Liebert, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.29 Å

1yf3
Literature

T4dam in complex with adohcy and 13-mer oligonucleotide making non- and semi-specific (~1/4) contact

Cheng, X. , Hattman, S. , Horton, J.R. , Jeltsch, A. , Liebert, K.

Primary Citation of Related Structures: 1YF3


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*AP*CP*CP*AP*TP*GP*AP*TP*CP*TP*GP*AP*C)-3' c 13 NA ACCATGATCTGAC
5'-D(*TP*GP*TP*CP*AP*GP*AP*TP*CP*AP*TP*GP*G)-3' d 13 NA TGTCAGATCATGG

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA adenine methylase A 259 Enterobacteria Phage T4 , Synthetic Construct MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLSKTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINYKGNFTTPFGKRTINKNSEKRFNHFKQNCDKIIFSSLHFKDVKILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGLSNVLEHHGKENTLLKEWSKKYNVKHLNKKYVFNIYHSKEKNGTDEVYIFN
DNA adenine methylase B 259 Enterobacteria Phage T4 , Synthetic Construct MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLSKTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINYKGNFTTPFGKRTINKNSEKRFNHFKQNCDKIIFSSLHFKDVKILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGLSNVLEHHGKENTLLKEWSKKYNVKHLNKKYVFNIYHSKEKNGTDEVYIFN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2004-12-30
Deposition Author(s): Cheng, X. , Hattman, S. , Horton, J.R. , Jeltsch, A. , Liebert, K.