1XSL
Crystal structure of human dna polymerase lambda in complex with a one nucleotide dna gap
PDB DOI: 10.2210/pdb1xsl/pdb
Classification: TRANSFERASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2004-10-19 Deposition Author(s): Bebenek, K. , Garcia-Diaz, M. , Krahn, J.M. , Kunkel, T.A. , Pedersen, L.C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
Crystal structure of human dna polymerase lambda in complex with a one nucleotide dna gap
Bebenek, K. , Garcia-Diaz, M. , Krahn, J.M. , Kunkel, T.A. , Pedersen, L.C.
Primary Citation of Related Structures: 1XSL
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3' | b | 11 | NA | CGGCAGCGCAC |
| 5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3' | f | 11 | NA | CGGCAGCGCAC |
| 5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3' | j | 11 | NA | CGGCAGCGCAC |
| 5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3' | n | 11 | NA | CGGCAGCGCAC |
| 5'-D(*GP*TP*GP*CP*GP*C)-3' | c | 6 | NA | GTGCGC |
| 5'-D(*GP*TP*GP*CP*GP*C)-3' | g | 6 | NA | GTGCGC |
| 5'-D(*GP*TP*GP*CP*GP*C)-3' | k | 6 | NA | GTGCGC |
| 5'-D(*GP*TP*GP*CP*GP*C)-3' | o | 6 | NA | GTGCGC |
| 5'-D(P*GP*CP*CP*G)-3' | d | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | h | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | l | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | p | 4 | NA | GCCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase lambda | A | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | E | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | I | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | M | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2004-10-19 Deposition Author(s): Bebenek, K. , Garcia-Diaz, M. , Krahn, J.M. , Kunkel, T.A. , Pedersen, L.C.