1X9W
T7 dna polymerase in complex with a primer/template dna containing a disordered n-2 aminofluorene on the template, crystallized with dideoxy-atp as the incoming nucleotide.
PDB DOI: 10.2210/pdb1x9w/pdb
Classification: TRANSFERASE/ELECTRON TRANSPORT/DNA Organism(s): Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct
Deposited: 2004-08-24 Deposition Author(s): Dutta, S. , Dzantiev, L. , Ellenberger, T. , Johnson, D. , Li, Y. , Richardson, C.C. , Romano, L.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
T7 dna polymerase in complex with a primer/template dna containing a disordered n-2 aminofluorene on the template, crystallized with dideoxy-atp as the incoming nucleotide.
Dutta, S. , Dzantiev, L. , Ellenberger, T. , Johnson, D. , Li, Y. , Richardson, C.C. , Romano, L.J.
Primary Citation of Related Structures: 1X9W
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*GP*AP*GP*AP*GP*TP*GP*AP*TP*T*GP*GP*T*AP*GP*TP*GP*TP*GP*AP*(2DT))-3' | c | 22 | NA | GGAGAGTGATTGGTAGTGTGAT |
| 5'-D(*CP*CP*CP*(AFG)*AP*TP*CP*AP*CP*AP*CP*TP*AP*CP*CP*AP*AP*TP*CP*AP*CP*TP*CP*TP*CP*C)-3' | d | 26 | NA | CCCGATCACACTACCAATCACTCTCC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase | A | 698 | Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct | MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKNKAQREGREPCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH |
| Thioredoxin 1 | B | 108 | Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct | SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2004-08-24 Deposition Author(s): Dutta, S. , Dzantiev, L. , Ellenberger, T. , Johnson, D. , Li, Y. , Richardson, C.C. , Romano, L.J.