PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

1VKX

Crystal structure of the nfkb p50/p65 heterodimer complexed to the immunoglobulin kb dna

PDB DOI: 10.2210/pdb1vkx/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 1997-09-17
Deposition Author(s): Chen, F. , Ghosh, G. , Huang, D.B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

Literature

Crystal structure of the nfkb p50/p65 heterodimer complexed to the immunoglobulin kb dna

Chen, F. , Ghosh, G. , Huang, D.B.

Primary Citation of Related Structures: 1VKX


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*C)-3') c 12 NA TGGGGACTTTCC
DNA (5'-D(*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*C)-3') d 12 NA AGGAAAGTCCCC

Proteins
Molecule Chains Sequence Length Organism Sequence
PROTEIN (NF-KAPPA B P65 SUBUNIT) A 273 Mus Musculus , Synthetic Construct AYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD
PROTEIN (NF-KAPPA B P50 SUBUNIT) B 312 Mus Musculus , Synthetic Construct GPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 1997-09-17
Deposition Author(s): Chen, F. , Ghosh, G. , Huang, D.B.