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1UUT

The nuclease domain of adeno-associated virus rep complexed with the rbe' stemloop of the viral inverted terminal repeat

PDB DOI: 10.2210/pdb1uut/pdb

Classification: HYDROLASE/DNA
Organism(s): Haemophilus Influenzae Rd Kw20 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2004-01-10
Deposition Author(s): Dyda, F. , Hickman, A.B. , Kotin, R.M. , Perez, Z.N. , Ronning, D.R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

Literature

The nuclease domain of adeno-associated virus rep complexed with the rbe' stemloop of the viral inverted terminal repeat

Dyda, F. , Hickman, A.B. , Kotin, R.M. , Perez, Z.N. , Ronning, D.R.

Primary Citation of Related Structures: 1UUT


Proteins
Molecule Chains Sequence Length Organism Sequence
REP PROTEIN A 197 Haemophilus Influenzae Rd Kw20 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MATFYEVIVRVPFDVEEHLPGISDSFVDWVTGQIWELPPESDLNLTLVEQPQLTVADRIRRVFLYEWNKFSKQESKFFVQFEKGSEYFHLHTLVETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQINDWVAITKVKKGGANKVVDSGYIPAYLLPKVQPELQWAWTNLDEYKLAALNLEERKRLVAQFLAESSQRS
REP PROTEIN B 197 Haemophilus Influenzae Rd Kw20 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MATFYEVIVRVPFDVEEHLPGISDSFVDWVTGQIWELPPESDLNLTLVEQPQLTVADRIRRVFLYEWNKFSKQESKFFVQFEKGSEYFHLHTLVETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQINDWVAITKVKKGGANKVVDSGYIPAYLLPKVQPELQWAWTNLDEYKLAALNLEERKRLVAQFLAESSQRS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*AP*GP*CP*TP*CP*TP*TP*TP*GP *AP*GP*CP*TP*G)-3' c 15 NA CAGCTCTTTGAGCTG
5'-D(*CP*AP*GP*CP*TP*CP*TP*TP*TP*GP *AP*GP*CP*TP*G)-3' d 15 NA CAGCTCTTTGAGCTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2004-01-10
Deposition Author(s): Dyda, F. , Hickman, A.B. , Kotin, R.M. , Perez, Z.N. , Ronning, D.R.