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1UTD

The structure of the trp rna-binding attenuation protein (trap) bound to a 63-nucleotide rna molecule containing gaguuu repeats

PDB DOI: 10.2210/pdb1utd/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Bacillus Stearothermophilus , Synthetic Construct

Deposited: 2003-12-08
Deposition Author(s): Antson, A.A. , Brzozowski, A.M. , Gollnick, P. , Hopcroft, N.H. , Manfredo, A. , Wendt, A.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

1utd
Literature

The structure of the trp rna-binding attenuation protein (trap) bound to a 63-nucleotide rna molecule containing gaguuu repeats

Antson, A.A. , Brzozowski, A.M. , Gollnick, P. , Hopcroft, N.H. , Manfredo, A. , Wendt, A.L.

Primary Citation of Related Structures: 1UTD


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-R(*GP*UP*UP*UP*GP*AP)-3' 0 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 1 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 2 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 3 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 4 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 5 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 6 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 7 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 8 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' 9 6 NA GUUUGA
5'-R(*GP*UP*UP*UP*GP*AP)-3' z 6 NA GUUUGA

Proteins
Molecule Chains Sequence Length Organism Sequence
TRANSCRIPTION ATTENUATION PROTEIN MTRB A 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB B 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB C 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB D 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB E 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB F 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB G 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB H 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB I 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB J 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB K 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB L 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB M 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB N 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB O 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB P 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB Q 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB R 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB S 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB T 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB U 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
TRANSCRIPTION ATTENUATION PROTEIN MTRB V 74 Bacillus Stearothermophilus , Synthetic Construct MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2003-12-08
Deposition Author(s): Antson, A.A. , Brzozowski, A.M. , Gollnick, P. , Hopcroft, N.H. , Manfredo, A. , Wendt, A.L.