1TK0
T7 dna polymerase ternary complex with 8 oxo guanosine and ddctp at the insertion site
PDB DOI: 10.2210/pdb1tk0/pdb
Classification: TRANSFERASE/ELECTRON TRANSPORT/DNA Organism(s): Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct
Deposited: 2004-06-07 Deposition Author(s): Brieba, L.G. , Doublie, S. , Eichman, B.F. , Ellenberger, T. , Kokoska, R.J. , Kunkel, T.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
T7 dna polymerase ternary complex with 8 oxo guanosine and ddctp at the insertion site
Brieba, L.G. , Doublie, S. , Eichman, B.F. , Ellenberger, T. , Kokoska, R.J. , Kunkel, T.A.
Primary Citation of Related Structures: 1TK0
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*A*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*(DDG))-3' | p | 22 | NA | CGAAAACGACGGCCAGTGCCAG |
| 5'-D(*CP*CP*CP*(8OG)P*CP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3' | t | 26 | NA | CCCGCTGGCACTGGCCGTCGTTTTCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase | A | 698 | Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct | MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKNKAQREGREPCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH |
| Thioredoxin 1 | B | 108 | Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct | SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2004-06-07 Deposition Author(s): Brieba, L.G. , Doublie, S. , Eichman, B.F. , Ellenberger, T. , Kokoska, R.J. , Kunkel, T.A.