PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

1T8I

Human dna topoisomerase i (70 kda) in complex with the poison camptothecin and covalent complex with a 22 base pair dna duplex

PDB DOI: 10.2210/pdb1t8i/pdb

Classification: ISOMERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2004-05-12
Deposition Author(s): Burgin, A.B. , Cushman, M. , Feese, M.D. , Pommier, Y. , Staker, B.L. , Stewart, L. , Zembower, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

Literature

Human dna topoisomerase i (70 kda) in complex with the poison camptothecin and covalent complex with a 22 base pair dna duplex

Burgin, A.B. , Cushman, M. , Feese, M.D. , Pommier, Y. , Staker, B.L. , Stewart, L. , Zembower, D.

Primary Citation of Related Structures: 1T8I


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*T)-3' b 10 NA AAAAAGACTT
5'-D(*(TGP)P*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3' c 12 NA GGAAAAATTTTT
5'-D(*AP*AP*AP*AP*AP*TP*TP*TP*TP*TP*CP*CP*AP*AP*GP*TP*CP*TP*TP*TP*TP*T)-3' d 22 NA AAAAATTTTTCCAAGTCTTTTT

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA topoisomerase I A 592 Homo Sapiens , Synthetic Construct KKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2004-05-12
Deposition Author(s): Burgin, A.B. , Cushman, M. , Feese, M.D. , Pommier, Y. , Staker, B.L. , Stewart, L. , Zembower, D.