1SL2
Ternary 5' complex of t7 dna polymerase with a dna primer/template containing a cis-syn thymine dimer on the template and an incoming nucleotide
PDB DOI: 10.2210/pdb1sl2/pdb
Classification: TRANSFERASE/ELECTRON TRANSPORT/DNA Organism(s): Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct
Deposited: 2004-03-05 Deposition Author(s): Bdour, H.M. , Doublie, S. , Dutta, S. , Ellenberger, T. , Li, Y. , Taylor, J.S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
Ternary 5' complex of t7 dna polymerase with a dna primer/template containing a cis-syn thymine dimer on the template and an incoming nucleotide
Bdour, H.M. , Doublie, S. , Dutta, S. , Ellenberger, T. , Li, Y. , Taylor, J.S.
Primary Citation of Related Structures: 1SL2
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*TP*(2DA))-3' | p | 22 | NA | CGAAAACGACGGCCAGTGCCTA |
| 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3' | t | 25 | NA | CCCTAGGCACTGGCCGTCGTTTTCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase | A | 698 | Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct | MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKNKAQREGREPCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH |
| Thioredoxin 1 | B | 108 | Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct | SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2004-03-05 Deposition Author(s): Bdour, H.M. , Doublie, S. , Dutta, S. , Ellenberger, T. , Li, Y. , Taylor, J.S.