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1SKS

Binary 3' complex of t7 dna polymerase with a dna primer/template containing a cis-syn thymine dimer on the template

PDB DOI: 10.2210/pdb1sks/pdb

Classification: TRANSFERASE/ELECTRON TRANSPORT/DNA
Organism(s): Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct

Deposited: 2004-03-05
Deposition Author(s): Bdour, H.M. , Doublie, S. , Dutta, S. , Ellenberger, T. , Li, Y. , Taylor, J.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

1sks
Literature

Binary 3' complex of t7 dna polymerase with a dna primer/template containing a cis-syn thymine dimer on the template

Bdour, H.M. , Doublie, S. , Dutta, S. , Ellenberger, T. , Li, Y. , Taylor, J.S.

Primary Citation of Related Structures: 1SKS


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*C*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*(2DT))-3' p 21 NA CGAAAACGACGGCCAGTGCCT
5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3' t 25 NA CCCTAGGCACTGGCCGTCGTTTTCG

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase A 698 Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKNKAQREGREPCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH
Thioredoxin 1 B 108 Enterobacteria Phage T7 , Escherichia Coli , Synthetic Construct SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2004-03-05
Deposition Author(s): Bdour, H.M. , Doublie, S. , Dutta, S. , Ellenberger, T. , Li, Y. , Taylor, J.S.