1S97
Dpo4 with gt mismatch
PDB DOI: 10.2210/pdb1s97/pdb
Classification: TRANSFERASE/DNA Organism(s): Sulfolobus Solfataricus , Synthetic Construct
Deposited: 2004-02-03 Deposition Author(s): Aggarwal, A.K. , Escalante, C.R. , Johnson, R.E. , Prakash, L. , Prakash, S. , Trincao, J. , Wolfle, W.T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.4 Å
Dpo4 with gt mismatch
Aggarwal, A.K. , Escalante, C.R. , Johnson, R.E. , Prakash, L. , Prakash, S. , Trincao, J. , Wolfle, W.T.
Primary Citation of Related Structures: 1S97
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*G)-3' | e | 13 | NA | GGGGGAAGGACTG |
| 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*G)-3' | f | 13 | NA | GGGGGAAGGACTG |
| 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*G)-3' | g | 13 | NA | GGGGGAAGGACTG |
| 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*G)-3' | h | 13 | NA | GGGGGAAGGACTG |
| 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3' | i | 18 | NA | TTCAGTAGTCCTTCCCCC |
| 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3' | j | 18 | NA | TTCAGTAGTCCTTCCCCC |
| 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3' | k | 18 | NA | TTCAGTAGTCCTTCCCCC |
| 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3' | l | 18 | NA | TTCAGTAGTCCTTCCCCC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase IV | A | 352 | Sulfolobus Solfataricus , Synthetic Construct | MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT |
| DNA polymerase IV | B | 352 | Sulfolobus Solfataricus , Synthetic Construct | MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT |
| DNA polymerase IV | C | 352 | Sulfolobus Solfataricus , Synthetic Construct | MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT |
| DNA polymerase IV | D | 352 | Sulfolobus Solfataricus , Synthetic Construct | MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2004-02-03 Deposition Author(s): Aggarwal, A.K. , Escalante, C.R. , Johnson, R.E. , Prakash, L. , Prakash, S. , Trincao, J. , Wolfle, W.T.