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1S0O

Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift

PDB DOI: 10.2210/pdb1s0o/pdb

Classification: TRANSFERASE/DNA
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2003-12-31
Deposition Author(s): Boudsocq, F. , Ling, H. , Woodgate, R. , Yang, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

1s0o
Literature

Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift

Boudsocq, F. , Ling, H. , Woodgate, R. , Yang, W.

Primary Citation of Related Structures: 1S0O


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3' c 13 NA GGGGGAAGGACTC
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3' e 13 NA GGGGGAAGGACTC
5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3' d 17 NA TCAGTAGTCCTTCCCCC
5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3' f 17 NA TCAGTAGTCCTTCCCCC

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 352 Sulfolobus Solfataricus , Synthetic Construct MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
DNA polymerase IV B 352 Sulfolobus Solfataricus , Synthetic Construct MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2003-12-31
Deposition Author(s): Boudsocq, F. , Ling, H. , Woodgate, R. , Yang, W.