1RZT
Crystal structure of dna polymerase lambda complexed with a two nucleotide gap dna molecule
PDB DOI: 10.2210/pdb1rzt/pdb
Classification: TRANSFERASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2003-12-29 Deposition Author(s): Bebenek, K. , Blanco, L. , Garcia-Diaz, M. , Krahn, J.M. , Kunkel, T.A. , Pedersen, L.C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.1 Å
Crystal structure of dna polymerase lambda complexed with a two nucleotide gap dna molecule
Bebenek, K. , Blanco, L. , Garcia-Diaz, M. , Krahn, J.M. , Kunkel, T.A. , Pedersen, L.C.
Primary Citation of Related Structures: 1RZT
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3' | b | 11 | NA | CGGCAACGCAC |
| 5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3' | f | 11 | NA | CGGCAACGCAC |
| 5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3' | j | 11 | NA | CGGCAACGCAC |
| 5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3' | n | 11 | NA | CGGCAACGCAC |
| 5'-D(*GP*TP*GP*CP*G)-3' | c | 5 | NA | GTGCG |
| 5'-D(*GP*TP*GP*CP*G)-3' | g | 5 | NA | GTGCG |
| 5'-D(*GP*TP*GP*CP*G)-3' | k | 5 | NA | GTGCG |
| 5'-D(*GP*TP*GP*CP*G)-3' | o | 5 | NA | GTGCG |
| 5'-D(P*GP*CP*CP*G)-3' | d | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | h | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | l | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | p | 4 | NA | GCCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase lambda | A | 331 | Homo Sapiens , Synthetic Construct | SSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | E | 331 | Homo Sapiens , Synthetic Construct | SSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | I | 331 | Homo Sapiens , Synthetic Construct | SSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | M | 331 | Homo Sapiens , Synthetic Construct | SSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2003-12-29 Deposition Author(s): Bebenek, K. , Blanco, L. , Garcia-Diaz, M. , Krahn, J.M. , Kunkel, T.A. , Pedersen, L.C.