1RTD
Structure of a catalytic complex of hiv-1 reverse transcriptase: implications for nucleoside analog drug resistance
PDB DOI: 10.2210/pdb1rtd/pdb
Classification: TRANSFERASE/DNA Organism(s): Human Immunodeficiency Virus 1 , Synthetic Construct
Deposited: 1998-08-26 Deposition Author(s): Chopra, R. , Harrison, S.C. , Huang, H. , Verdine, G.L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.2 Å
Structure of a catalytic complex of hiv-1 reverse transcriptase: implications for nucleoside analog drug resistance
Chopra, R. , Harrison, S.C. , Huang, H. , Verdine, G.L.
Primary Citation of Related Structures: 1RTD
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA TEMPLATE FOR REVERSE TRANSCRIPTASE | e | 27 | NA | ATGCACCGGCGCTCGAACAGGGACTGT |
| DNA TEMPLATE FOR REVERSE TRANSCRIPTASE | g | 27 | NA | ATGCACCGGCGCTCGAACAGGGACTGT |
| DNA PRIMER FOR REVERSE TRANSCRIPTASE | f | 21 | NA | CAGTCCCTGTTCGAGCGCCGG |
| DNA PRIMER FOR REVERSE TRANSCRIPTASE | h | 21 | NA | CAGTCCCTGTTCGAGCGCCGG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| PROTEIN (REVERSE TRANSCRIPTASE) | A | 554 | Human Immunodeficiency Virus 1 , Synthetic Construct | KISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDICKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTDTTNQKTQLQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDESESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSA |
| PROTEIN (REVERSE TRANSCRIPTASE) | C | 554 | Human Immunodeficiency Virus 1 , Synthetic Construct | KISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDICKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTDTTNQKTQLQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDESESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSA |
| PROTEIN (REVERSE TRANSCRIPTASE) | B | 440 | Human Immunodeficiency Virus 1 , Synthetic Construct | PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETF |
| PROTEIN (REVERSE TRANSCRIPTASE) | D | 440 | Human Immunodeficiency Virus 1 , Synthetic Construct | PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 1998-08-26 Deposition Author(s): Chopra, R. , Harrison, S.C. , Huang, H. , Verdine, G.L.