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1R3E
Crystal structure of trna pseudouridine synthase trub and its rna complex: rna-protein recognition through a combination of rigid docking and induced fit
PDB DOI: 10.2210/pdb1r3e/pdb
Classification: LYASE/RNA Organism(s): Thermotoga Maritima , Synthetic Construct
Deposited: 2003-10-01 Deposition Author(s): Agarwalla, S. , Finer-Moore, J. , Moustakas, D.T. , Pan, H. , Stroud, R.M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.1 Å
Crystal structure of trna pseudouridine synthase trub and its rna complex: rna-protein recognition through a combination of rigid docking and induced fit
Agarwalla, S. , Finer-Moore, J. , Moustakas, D.T. , Pan, H. , Stroud, R.M.
Primary Citation of Related Structures: 1R3E
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-R(*CP*UP*GP*UP*GP*UP*(FHU)P*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3' | c | 17 | NA | CUGUGUUCGAUCCACAG |
| 5'-R(*CP*UP*GP*UP*GP*UP*UP*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3' | d | 17 | NA | CUGUGUUCGAUCCACAG |
| 5'-R(*CP*UP*GP*UP*GP*UP*UP*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3' | e | 17 | NA | CUGUGUUCGAUCCACAG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| tRNA pseudouridine synthase B | A | 309 | Thermotoga Maritima , Synthetic Construct | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETFDITGEVVEERECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRDVSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRKHERNERVLTLRKVFNTR |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2003-10-01 Deposition Author(s): Agarwalla, S. , Finer-Moore, J. , Moustakas, D.T. , Pan, H. , Stroud, R.M.