Crystal structure of a wild-type cre recombinase-loxp synapse: phosphotyrosine covalent intermediate
PDB DOI: 10.2210/pdb1q3v/pdb
Classification: REPLICATION/DNA Organism(s): Enterobacteria Phage P1 , Synthetic Construct
Deposited: 2003-08-01 Deposition Author(s): Buchholz, F. , Ennifar, E. , Meyer, J.E.W. , Stewart, A.F. , Suck, D.
Method: X-RAY DIFFRACTION Resolution: 2.91 Å
Crystal structure of a wild-type cre recombinase-loxp synapse: phosphotyrosine covalent intermediate
Buchholz, F. , Ennifar, E. , Meyer, J.E.W. , Stewart, A.F. , Suck, D.
Primary Citation of Related Structures: 1Q3V
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
loxP DNA | c | 16 | NA | CGATAACUTCGTATAA |
loxP DNA | g | 16 | NA | CGATAACUTCGTATAA |
loxP DNA | x | 21 | NA | TGTATGCTATACGAAGTTATC |
loxP DNA | y | 21 | NA | TGTATGCTATACGAAGTTATC |
loxP DNA | d | 37 | NA | GGATAACTTCGTATAGCATACATTATACGAAGTTATC |
loxP DNA | h | 37 | NA | GGATAACTTCGTATAGCATACATTATACGAAGTTATC |
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Cre recombinase | A | 347 | Enterobacteria Phage P1 , Synthetic Construct | FQVPMSNLLTVHQNLPALPVDATSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLEDGD |
Cre recombinase | B | 347 | Enterobacteria Phage P1 , Synthetic Construct | FQVPMSNLLTVHQNLPALPVDATSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLEDGD |
Cre recombinase | E | 347 | Enterobacteria Phage P1 , Synthetic Construct | FQVPMSNLLTVHQNLPALPVDATSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLEDGD |
Cre recombinase | F | 347 | Enterobacteria Phage P1 , Synthetic Construct | FQVPMSNLLTVHQNLPALPVDATSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLEDGD |
Method: X-RAY DIFFRACTION
Deposited Date: 2003-08-01 Deposition Author(s): Buchholz, F. , Ennifar, E. , Meyer, J.E.W. , Stewart, A.F. , Suck, D.