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1PP8

Crystal structure of the t. vaginalis ibp39 initiator binding domain (ibd) bound to the alpha-scs inr element

PDB DOI: 10.2210/pdb1pp8/pdb

Classification: Transcription/DNA
Organism(s): Trichomonas Vaginalis , Synthetic Construct

Deposited: 2003-06-16
Deposition Author(s): Johnson, P.J. , Lau, A.O.T. , Schumacher, M.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.05 Å

1pp8
Literature

Crystal structure of the t. vaginalis ibp39 initiator binding domain (ibd) bound to the alpha-scs inr element

Johnson, P.J. , Lau, A.O.T. , Schumacher, M.A.

Primary Citation of Related Structures: 1PP8


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
ALPHA-SCS INR e 12 NA GTCACTTCACAT
ALPHA-SCS INR i 12 NA GTCACTTCACAT
ALPHA-SCS INR y 12 NA GTCACTTCACAT
ALPHA-SCS INR k 12 NA GTCACTTCACAT
ALPHA-SCS INR t 12 NA CATGTGAAGTGA
ALPHA-SCS INR r 12 NA CATGTGAAGTGA
ALPHA-SCS INR j 12 NA CATGTGAAGTGA
ALPHA-SCS INR g 12 NA CATGTGAAGTGA

Proteins
Molecule Chains Sequence Length Organism Sequence
39 kDa initiator binding protein U 132 Trichomonas Vaginalis , Synthetic Construct MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFEDPTQNDSPMHHHHHH
39 kDa initiator binding protein P 132 Trichomonas Vaginalis , Synthetic Construct MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFEDPTQNDSPMHHHHHH
39 kDa initiator binding protein F 132 Trichomonas Vaginalis , Synthetic Construct MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFEDPTQNDSPMHHHHHH
39 kDa initiator binding protein V 132 Trichomonas Vaginalis , Synthetic Construct MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFEDPTQNDSPMHHHHHH
39 kDa initiator binding protein M 132 Trichomonas Vaginalis , Synthetic Construct MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFEDPTQNDSPMHHHHHH
39 kDa initiator binding protein O 132 Trichomonas Vaginalis , Synthetic Construct MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFEDPTQNDSPMHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2003-06-16
Deposition Author(s): Johnson, P.J. , Lau, A.O.T. , Schumacher, M.A.