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1OOA

Crystal structure of nf-kb(p50)2 complexed to a high-affinity rna aptamer

PDB DOI: 10.2210/pdb1ooa/pdb

Classification: TRANSCRIPTION/RNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2003-03-03
Deposition Author(s): Cassiday, L.A. , Ghosh, G. , Huang, D.B. , Maher Iii, L.J. , Vu, D. , Zimmerman, J.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.45 Å

Literature

Crystal structure of nf-kb(p50)2 complexed to a high-affinity rna aptamer

Cassiday, L.A. , Ghosh, G. , Huang, D.B. , Maher Iii, L.J. , Vu, D. , Zimmerman, J.M.

Primary Citation of Related Structures: 1OOA


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA aptamer c 29 NA CAUACUUGAAACUGUAAGGUUGGCGUAUG
RNA aptamer d 29 NA CAUACUUGAAACUGUAAGGUUGGCGUAUG

Proteins
Molecule Chains Sequence Length Organism Sequence
Nuclear factor NF-kappa-B p105 subunit A 326 Mus Musculus , Synthetic Construct GGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQK
Nuclear factor NF-kappa-B p105 subunit B 326 Mus Musculus , Synthetic Construct GGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2003-03-03
Deposition Author(s): Cassiday, L.A. , Ghosh, G. , Huang, D.B. , Maher Iii, L.J. , Vu, D. , Zimmerman, J.M.