1O3T
Protein-dna recognition and dna deformation revealed in crystal structures of cap-dna complexes
PDB DOI: 10.2210/pdb1o3t/pdb
Classification: GENE REGULATION/DNA Organism(s): Escherichia Coli , Synthetic Construct
Deposited: 2003-03-18 Deposition Author(s): Berman, H.M. , Chen, S. , Ebright, R.H. , Parkinson, G.N. , Vojtechovsky, J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.8 Å
Protein-dna recognition and dna deformation revealed in crystal structures of cap-dna complexes
Berman, H.M. , Chen, S. , Ebright, R.H. , Parkinson, G.N. , Vojtechovsky, J.
Primary Citation of Related Structures: 1O3T
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3' | c | 14 | NA | GCGAAAAATGCGAT |
| 5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3' | f | 14 | NA | GCGAAAAATGCGAT |
| 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*TP*CP*G)-3' | d | 17 | NA | CTAGATCGCATTTTTCG |
| 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*TP*CP*G)-3' | e | 17 | NA | CTAGATCGCATTTTTCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CATABOLITE GENE ACTIVATOR PROTEIN | A | 200 | Escherichia Coli , Synthetic Construct | DPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG |
| CATABOLITE GENE ACTIVATOR PROTEIN | B | 200 | Escherichia Coli , Synthetic Construct | DPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2003-03-18 Deposition Author(s): Berman, H.M. , Chen, S. , Ebright, R.H. , Parkinson, G.N. , Vojtechovsky, J.