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1NGM

Crystal structure of a yeast brf1-tbp-dna ternary complex

PDB DOI: 10.2210/pdb1ngm/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Saccharomyces Cerevisiae , Synthetic Construct

Deposited: 2002-12-17
Deposition Author(s): Geiduschek, E.P. , Juo, Z.S. , Kassavetis, G.A. , Sigler, P.B. , Wang, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.95 Å

1ngm
Literature

Crystal structure of a yeast brf1-tbp-dna ternary complex

Geiduschek, E.P. , Juo, Z.S. , Kassavetis, G.A. , Sigler, P.B. , Wang, J.

Primary Citation of Related Structures: 1NGM


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3' c 19 NA CTATAAAAAAATGTTTTTT
5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3' g 19 NA CTATAAAAAAATGTTTTTT
5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3' k 19 NA CTATAAAAAAATGTTTTTT
5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3' o 19 NA CTATAAAAAAATGTTTTTT
5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3' d 19 NA AAAAAACATTTTTTTATAG
5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3' h 19 NA AAAAAACATTTTTTTATAG
5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3' l 19 NA AAAAAACATTTTTTTATAG
5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3' p 19 NA AAAAAACATTTTTTTATAG

Proteins
Molecule Chains Sequence Length Organism Sequence
Transcription initiation factor TFIID A 180 Saccharomyces Cerevisiae , Synthetic Construct SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM
Transcription initiation factor TFIID E 180 Saccharomyces Cerevisiae , Synthetic Construct SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM
Transcription initiation factor TFIID I 180 Saccharomyces Cerevisiae , Synthetic Construct SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM
Transcription initiation factor TFIID M 180 Saccharomyces Cerevisiae , Synthetic Construct SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM
Transcription factor IIIB BRF1 subunit B 72 Saccharomyces Cerevisiae , Synthetic Construct GSYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQESKRLKQE
Transcription factor IIIB BRF1 subunit F 72 Saccharomyces Cerevisiae , Synthetic Construct GSYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQESKRLKQE
Transcription factor IIIB BRF1 subunit J 72 Saccharomyces Cerevisiae , Synthetic Construct GSYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQESKRLKQE
Transcription factor IIIB BRF1 subunit N 72 Saccharomyces Cerevisiae , Synthetic Construct GSYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQESKRLKQE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2002-12-17
Deposition Author(s): Geiduschek, E.P. , Juo, Z.S. , Kassavetis, G.A. , Sigler, P.B. , Wang, J.