Crystal structure of human d-dimer from cross-linked fibrin complexed with gpr and ghrpldk peptide ligands.
PDB DOI: 10.2210/pdb1n86/pdb
Classification: BLOOD CLOTTING Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2002-11-19 Deposition Author(s): Doolittle, R.F. , Pandi, L. , Yang, Z.
Crystal structure of human d-dimer from cross-linked fibrin complexed with gpr and ghrpldk peptide ligands.
Doolittle, R.F. , Pandi, L. , Yang, Z.
Primary Citation of Related Structures: 1N86
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Fibrin alpha/alpha-E chain | A | 87 | Homo Sapiens , Synthetic Construct | VSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSR |
Fibrin alpha/alpha-E chain | D | 87 | Homo Sapiens , Synthetic Construct | VSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSR |
Fibrin beta chain | B | 328 | Homo Sapiens , Synthetic Construct | DNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKMSMKIRPFFPQQ |
Fibrin beta chain | E | 328 | Homo Sapiens , Synthetic Construct | DNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKMSMKIRPFFPQQ |
Fibrin gamma chain | C | 324 | Homo Sapiens , Synthetic Construct | KMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV |
Fibrin gamma chain | F | 324 | Homo Sapiens , Synthetic Construct | KMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV |
fibrin alpha chain peptide ligand fragment Gly-Pro-Arg | G | 3 | Homo Sapiens , Synthetic Construct | GPR |
fibrin alpha chain peptide ligand fragment Gly-Pro-Arg | H | 3 | Homo Sapiens , Synthetic Construct | GPR |
fibrin beta chain peptide ligand fragment Gly-His-Arg-Pro-Leu-Asp-Lys | I | 7 | Homo Sapiens , Synthetic Construct | GHRPLDK |
fibrin beta chain peptide ligand fragment Gly-His-Arg-Pro-Leu-Asp-Lys | J | 7 | Homo Sapiens , Synthetic Construct | GHRPLDK |
Method: X-RAY DIFFRACTION
Deposited Date: 2002-11-19 Deposition Author(s): Doolittle, R.F. , Pandi, L. , Yang, Z.